pileup.msfファイルの中身です。
human HOX タンパク13種を解析したものです。

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e4000[63]% more pileup.msf
!!AA_MULTIPLE_ALIGNMENT 1.0
PileUp of: *.pep

 Symbol comparison table: GenRunData:blosum62.cmp  CompCheck: 6430

                   GapWeight: 12
             GapLengthWeight: 4

 pileup.msf  MSF: 58  Type: P  February 28, 19101 16:34  Check: 4902 ..

 Name: humhoxa13        Len:    58  Check: 9056  Weight:  1.00
 Name: humhoxc12        Len:    58  Check: 8269  Weight:  1.00
 Name: humhoxa10        Len:    58  Check: 8669  Weight:  1.00
 Name: humhoxa9         Len:    58  Check: 8559  Weight:  1.00
 Name: humhoxa11        Len:    58  Check: 8214  Weight:  1.00
 Name: humhoxa2         Len:    58  Check: 7623  Weight:  1.00
 Name: humhoxa3         Len:    58  Check: 8049  Weight:  1.00
 Name: humhoxa6         Len:    58  Check: 7410  Weight:  1.00
 Name: humhoxa7         Len:    58  Check: 7193  Weight:  1.00
 Name: humhoxa4         Len:    58  Check: 8289  Weight:  1.00
 Name: humhoxa5         Len:    58  Check: 7035  Weight:  1.00
 Name: humhoxc8         Len:    58  Check: 8797  Weight:  1.00
 Name: humhoxa1         Len:    58  Check: 7739  Weight:  1.00

//

           1                                                   50
humhoxa13  RKKRVPYTKV QLKELEREYA TNKFITKDKR RRISATTNLS ERQVTIWFQN
humhoxc12  RKKRKPYSKL QLAELEGEFL VNEFITRQRR RELSDRLNLS DQQVKIWFQN
humhoxa10  RKKRCPYTKH QTLELEKEFL FNMYLTRERR LEISRSVHLT DRQVKIWFQN
 humhoxa9  RKKRCPYTKH QTLELEKEFL FNMYLTRDRR YEVARLLNLT ERQVKIWFQN
humhoxa11  RKKRCPYTKY QIRELEREFF FSVYINKEKR LQLSRMLNLT DRQVKIWFQN
 humhoxa2  RRLRTAYTNT QLLELEKEFH FNKYLCRPRR VEIAALLDLT ERQVKVWFQN
 humhoxa3  KRARTAYTSA QLVELEKEFH FNRYLCRPRR VEMANLLNLT ERQIKIWFQN
 humhoxa6  RRGRQTYTRY QTLELEKEFH FNRYLTRRRR IEIANALCLT ERQIKIWFQN
 humhoxa7  KRGRQTYTRY QTLELEKEFH FNRYLTRRRR IEIAHALCLT ERQIKIWFQN
 humhoxa4  KRSRTAYTRQ QVLELEKEFH FNRYLTRRRR IEIAHTLCLS ERQVKIWFQN
 humhoxa5  KRARTAYTRY QTLELEKEFH FNRYLTRRRR IEIAHALCLS ERQIKIWFQN
 humhoxc8  RSGRQTYSRY QTLELEKEFL FNPYLTRKRR IEVSHALGLT ERQVKIWFQN
 humhoxa1  NAVRTNFTTK QLTELEKEFH FNKYLTRARR VEIAASLQLN ETQVKIWFQN

           51
humhoxa13  RRVKEKKV
humhoxc12  RRMKKKRL
humhoxa10  RRMKLKKM
 humhoxa9  RRMKMKKI
humhoxa11  RRMKEKKI
 humhoxa2  RRMKHKRQ
 humhoxa3  RRMKYKKD
 humhoxa6  RRMKWKKE
 humhoxa7  RRMKWKKE
 humhoxa4  RRMKWKKD
 humhoxa5  RRMKWKKD
 humhoxc8  RRMKWKKE
 humhoxa1  RRMKQKKR

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Last update:03/07/2006